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Genomics Platform of the "Centro Nacional de Análisis Genómico " (CNAG)
Identification
Hosting Legal Entity
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Barcelona Science Park
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Location
Baldiri Reixac, 4, Centro Nacional de Análisis Genómico (CNAG) Barcelona Science Park Torre I, Barcelona, PO: 08028 (Spain)
Structure
Type Of RI
Single-sited
Coordinating Country
Spain
Status
Status
Current Status:
Operational
since 2010
Scientific Description
The National Genome Analysis Centre (Centro Nacional de Análisis Genómico-CNAG) mission is to carry out large-scale projects in genome analysis that will lead to significant improvements in people’s health and quality of life, in collaboration with the Catalan, Spanish, European and International research and clinical community. The integrated CNAG infrastructure produces more than 800 Gbases of sequence data per day and has one of the largest DNA sequencing capacities in Europe. Our particular strengths lie in cancer genomics, rare disease gene identification, infectious disease genomics, genomics of model organisms, agrogenomics, epigenomics, modeling of the nucleus, comparative genomics and single cell analysis. New laboratory methods, new sequencing methods and data analytical procedures implemented and developed continuously. CNAG is certified Illumina CS Pro – Certified Provider and Agilent Exome Sequencing Certified Provider.
RI Keywords
Genomics, MiSeq, Genotyping by sequencing, Epigenomics, Genome annotation, Differential gene expression, DNA, Metagenomics, Massive parallel sequencing, Single cell sequencing, Roche, 3D genomics, Alternative splicing, Exome, Illumina, NGS, HiSeq, De novo assembly, Variant calling, RNA, Methylome, Agilent
Classifications
RI Category
Databases
Genomic, Transcriptomic, Proteomics and Metabolomics Facilities
Data Mining and Analysis (Methodological) Centers, including statistical analysis
Bio-informatics Facilities
Genomic, Transcriptomic, Proteomics and Metabolomics Facilities
Data Mining and Analysis (Methodological) Centers, including statistical analysis
Bio-informatics Facilities
Scientific Domain
Biological and Medical Sciences
Engineering and Energy
Engineering and Energy
ESFRI Domain
Health and Food
Services
Sequencing Platform
High-throughput sequencing for a wide range of applications: whole genome sequencing, whole genome bisulphite sequencing, mate pair sequencing, exome capture sequencing, custom capture sequencing, amplicon sequencing and RNA sequencing.
Data Analysis Pipelines
Robust analysis pipelines for Mendelian and complex disease gene identification, somatic variant identification, de novo genome assembly, differential gene expression, identification of novel spliced isoforms, cytosine-methylation and HiC interaction data.
Equipment
Data Analysis Pipeline
1.250 cores of computing2.7 petabyte of data storage.
Sequencing Platform
2 Illumina HiSeq 25009 Illumina HiSeq 20001 Illumina MiSeq.
Collaborations
Networks
ESGI
International Cancer Genome Consortium (ICGC)
Date of last update: 17/03/2017
